7.0-Module6_Review_of_the_tools.Rmd

# Module 7: Review of the tools  

 *<font color="#827e9c">By Veronique Voisin, Chaitra Sarathy and Ruth Isserlin</font>*
 
## Final slides
[Lecture](./lectures/Pathways_2024_finalslides.pdf) 

##  Integrated assignment

[Integrated assignment](#integrated_assignment)

 - In this integrated assignment, all the tools viewed during the workshop from module 1 to module 5 are integrated. The dataset is a microarray dataset available publicly from GEO. 
 
## Integrated assignment bonus

[Automation](#ass_automation)

 - Experiment with automating your enrichment analysis pipeline using R.
 
## ClusterProfiler

[ClusterProfiler](#clusterprofiler_optionallab)