NAMESPACE

# Generated by roxygen2: do not edit by hand

export(calculate_MappingError)
export(create_ReferenceObject)
export(get_Composition)
export(knnPredict_Seurat)
export(load_Genesets_gmt)
export(map_Query)
export(plot_MappingErrorQC)
export(plot_Projection_BM)
export(plot_Projection_byDonor)
export(predict_CellTypes)
export(predict_Pseudotime)
export(save_ProjectionResults)
export(score_Genesets_AUCell)
import(doMC)
import(dplyr)
import(ggplot2)
import(symphony)
importFrom(AUCell,AUCell_buildRankings)
importFrom(AUCell,AUCell_calcAUC)
importFrom(Matrix,Matrix)
importFrom(RANN,nn2)
importFrom(Seurat,AddMetaData)
importFrom(Seurat,CreateAssayObject)
importFrom(Seurat,CreateDimReducObject)
importFrom(Seurat,CreateSeuratObject)
importFrom(Seurat,DimPlot)
importFrom(Seurat,Embeddings)
importFrom(Seurat,GetAssayData)
importFrom(Seurat,PercentageFeatureSet)
importFrom(Seurat,ProjectDim)
importFrom(SummarizedExperiment,assay)
importFrom(class,knn)
importFrom(dplyr,"%>%")
importFrom(dplyr,group_by)
importFrom(dplyr,mutate)
importFrom(dplyr,pull)
importFrom(dplyr,rename)
importFrom(dplyr,ungroup)
importFrom(ggpointdensity,geom_pointdensity)
importFrom(ggpubr,stat_compare_means)
importFrom(ggpubr,theme_pubr)
importFrom(grDevices,heat.colors)
importFrom(jcolors,scale_color_jcolors_contin)
importFrom(purrr,map)
importFrom(purrr,reduce)
importFrom(stats,mad)
importFrom(stats,mahalanobis)
importFrom(stats,median)
importFrom(stats,model.matrix)
importFrom(stats,sd)
importFrom(tibble,column_to_rownames)
importFrom(tibble,rownames_to_column)
importFrom(tidyr,pivot_wider)
importFrom(utils,write.csv)
importFrom(uwot,umap_transform)