dockerfile-dev

# Base image
FROM jupyterhub/singleuser

# Copy the repository into the image
ADD . /AIR_QUALITY

# Use root user for installations
USER root

# Install system dependencies for Python and Quarto
RUN apt-get update && apt-get install -y \
    libkrb5-dev \
    build-essential \
    curl \
    pandoc \
    libcurl4-openssl-dev \
    && apt-get clean && rm -rf /var/lib/apt/lists/*

# Install Quarto CLI
RUN curl -LO https://github.com/quarto-dev/quarto-cli/releases/download/v1.3.340/quarto-1.3.340-linux-amd64.deb \
    && dpkg -i quarto-1.3.340-linux-amd64.deb \
    && rm quarto-1.3.340-linux-amd64.deb

# Install Python packages
RUN pip install --no-cache-dir \
    quarto \
    jupyterlab-quarto \
    geopandas pyproj shapely xarray rioxarray \
    rasterio netcdf4 h5netcdf dask bottleneck nc-time-axis \
    numpy pandas matplotlib requests \
    rasterstats pygadm plotly pygris contextily tabulate \
    scipy pysal splot gssapi arcgis jupyterlab

# Enable JupyterLab extension for Quarto
RUN jupyter labextension enable jupyterlab-quarto

# Expose necessary ports
EXPOSE 8888 4200

# Set the working directory
WORKDIR /AIR_QUALITY

# Start JupyterLab
ENTRYPOINT ["jupyter", "lab", "--ip=0.0.0.0", "--port=8888", "--NotebookApp.token=''", "--allow-root", "--no-browser"]