diff --git a/README.md b/README.md index c2062a7..e152a65 100644 --- a/README.md +++ b/README.md @@ -83,12 +83,14 @@ in `./mothra` will run the pipeline on the example data in the folder `/mothra-d image2.jpg ... /test_output - image1.jpg (result image for image1.jpg) + image1.jpg image2.jpg ... results.csv ``` +`/test_output` contains the resulting images, i.e. `/test_output/image1.jpg` contains the results of `/mothra-data/image1.jpg`, `/test_output/image2.jpg` has the results of `/mothra-data/image2.jpg`, and so on. + For a larger repository of test data (~15 GB), please check [Wilson et al. (2020)](https://doi.org/10.5281/zenodo.3732132). ## Miscellaneous diff --git a/pipeline.py b/pipeline.py index 6c21786..4a18c57 100755 --- a/pipeline.py +++ b/pipeline.py @@ -173,7 +173,8 @@ def _read_filenames_in_folder(folder): def main(): # Assign description to the help doc parser = argparse.ArgumentParser( - description='Script to automate butterfly wings measurment') + description='This is mothra, a software to automate different\ + measurements on images of Lepidopterae.') # Add arguments # Plotting parser.add_argument('-p', '--plot',