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I have pre-normalized the data in Seurat, then converted to sce to run DEsingle (as discussed in Seurat's issues, counts=logcounts), but it seems to be re-normalizing the normalized data.
Can an argument be added to DEsingle command to not do further normalization?
The text was updated successfully, but these errors were encountered:
I suggest to use DEsingle's normalization step with your data or re-normalize the normalized data, since DEsingle's normalization step could ensure the data work with ZINB distribution.
I have pre-normalized the data in Seurat, then converted to sce to run DEsingle (as discussed in Seurat's issues,
counts
=logcounts
), but it seems to be re-normalizing the normalized data.Can an argument be added to DEsingle command to not do further normalization?
The text was updated successfully, but these errors were encountered: