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environment.yml
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name: sagbo-analysis
channels:
- astra-toolbox
- nvidia
- defaults
- astra-toolbox/label/dev
- n-vigano
- conda-forge
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_kmp_llvm
- anyio=4.2.0=py38h06a4308_0
- aom=3.6.0=h6a678d5_0
- argon2-cffi=21.3.0=pyhd3eb1b0_0
- argon2-cffi-bindings=21.2.0=py38h7f8727e_0
- astra-toolbox=2.1.0=py38h9d24096_0
- asttokens=2.0.5=pyhd3eb1b0_0
- attrs=23.1.0=py38h06a4308_0
- autopep8=1.6.0=pyhd3eb1b0_1
- backcall=0.2.0=pyhd3eb1b0_0
- beautifulsoup4=4.12.3=py38h06a4308_0
- bleach=4.1.0=pyhd3eb1b0_0
- blosc=1.21.3=h6a678d5_0
- brotli=1.0.9=h5eee18b_8
- brotli-bin=1.0.9=h5eee18b_8
- brunsli=0.1=h2531618_0
- bzip2=1.0.8=h5eee18b_6
- c-ares=1.19.1=h5eee18b_0
- ca-certificates=2024.3.11=h06a4308_0
- cached-property=1.5.2=py_0
- cffi=1.16.0=py38h5eee18b_1
- cfitsio=3.470=h5893167_7
- charls=2.2.0=h2531618_0
- click=8.1.7=py38h06a4308_0
- cloudpickle=2.2.1=py38h06a4308_0
- comm=0.2.1=py38h06a4308_0
- cuda=11.8.0=0
- cuda-cccl=12.1.55=0
- cuda-command-line-tools=12.1.0=0
- cuda-compiler=11.8.0=0
- cuda-cudart=12.1.55=0
- cuda-cudart-dev=12.1.55=0
- cuda-cudart-static=12.1.55=0
- cuda-cuobjdump=12.1.55=0
- cuda-cupti=12.1.62=0
- cuda-cupti-static=12.1.62=0
- cuda-cuxxfilt=12.1.55=0
- cuda-demo-suite=12.1.55=0
- cuda-documentation=12.1.55=0
- cuda-driver-dev=12.1.55=0
- cuda-gdb=12.1.55=0
- cuda-libraries=12.1.0=0
- cuda-libraries-dev=12.1.0=0
- cuda-libraries-static=12.1.0=0
- cuda-nsight=12.1.55=0
- cuda-nsight-compute=12.1.0=0
- cuda-nvcc=11.8.89=0
- cuda-nvdisasm=12.1.55=0
- cuda-nvml-dev=12.1.55=0
- cuda-nvprof=12.1.55=0
- cuda-nvprune=12.1.55=0
- cuda-nvrtc=12.1.55=0
- cuda-nvrtc-dev=12.1.55=0
- cuda-nvrtc-static=12.1.55=0
- cuda-nvtx=12.1.66=0
- cuda-nvvp=12.1.55=0
- cuda-opencl=12.1.56=0
- cuda-opencl-dev=12.1.56=0
- cuda-profiler-api=12.1.55=0
- cuda-runtime=12.1.0=0
- cuda-sanitizer-api=12.1.55=0
- cuda-toolkit=11.8.0=0
- cuda-tools=12.1.0=0
- cuda-version=11.3=hbc958af_3
- cuda-visual-tools=12.1.0=0
- cudatoolkit=11.3.1=h2bc3f7f_2
- cupy=12.3.0=py38h7b7cd4b_2
- cytoolz=0.12.2=py38h5eee18b_0
- dask-core=2023.4.1=py38h06a4308_0
- dav1d=1.2.1=h5eee18b_0
- debugpy=1.6.7=py38h6a678d5_0
- decorator=5.1.1=pyhd3eb1b0_0
- defusedxml=0.7.1=pyhd3eb1b0_0
- entrypoints=0.4=py38h06a4308_0
- exceptiongroup=1.2.0=py38h06a4308_0
- executing=0.8.3=pyhd3eb1b0_0
- expat=2.6.2=h6a678d5_0
- fastrlock=0.8.2=py38h17151c0_2
- fltk=1.3.8=h83e168f_0
- font-ttf-dejavu-sans-mono=2.37=hd3eb1b0_0
- font-ttf-inconsolata=2.001=hcb22688_0
- font-ttf-source-code-pro=2.030=hd3eb1b0_0
- font-ttf-ubuntu=0.83=h8b1ccd4_0
- fontconfig=2.14.2=h14ed4e7_0
- fonts-anaconda=1=h8fa9717_0
- fonts-conda-ecosystem=1=hd3eb1b0_0
- freeimage=3.18.0=h66f5774_11
- freetype=2.12.1=h4a9f257_0
- fsspec=2024.3.1=py38h06a4308_0
- gds-tools=1.6.0.25=0
- giflib=5.2.1=h5eee18b_3
- gmp=6.2.1=h295c915_3
- gmsh=4.11.0=h5c738d0_1
- h5py=3.8.0=nompi_py38hd5fa8ee_100
- hdf5=1.12.2=nompi_h4df4325_100
- hdf5plugin=4.1.1=py38h20bcb4d_0
- idna=3.7=py38h06a4308_0
- imagecodecs=2023.1.23=py38hc4b7b5f_0
- imageio=2.33.1=py38h06a4308_0
- imath=3.1.6=h6239696_1
- importlib-metadata=7.0.1=py38h06a4308_0
- importlib_resources=6.1.1=py38h06a4308_1
- ipykernel=6.28.0=py38h06a4308_0
- ipython=8.12.2=py38h06a4308_0
- ipython_genutils=0.2.0=pyhd3eb1b0_1
- ipywidgets=8.1.2=py38h06a4308_0
- jedi=0.18.1=py38h06a4308_1
- jinja2=3.1.4=py38h06a4308_0
- jpeg=9e=h5eee18b_1
- jsonschema=4.19.2=py38h06a4308_0
- jsonschema-specifications=2023.7.1=py38h06a4308_0
- jupyter=1.0.0=pyhd8ed1ab_10
- jupyter_client=7.4.9=py38h06a4308_0
- jupyter_console=6.6.3=py38h06a4308_0
- jupyter_core=5.7.2=py38h06a4308_0
- jupyter_events=0.10.0=py38h06a4308_0
- jupyter_server=2.14.1=py38h06a4308_0
- jupyter_server_terminals=0.4.4=py38h06a4308_1
- jupyterlab_pygments=0.2.2=py38h06a4308_0
- jupyterlab_widgets=3.0.10=py38h06a4308_0
- jxrlib=1.1=h7b6447c_2
- krb5=1.20.1=h143b758_1
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.38=h1181459_1
- lerc=3.0=h295c915_0
- libaec=1.0.4=he6710b0_1
- libastra=2.1.0=cuda_11.3_0
- libavif=0.11.1=h5eee18b_0
- libblas=3.9.0=16_linux64_openblas
- libbrotlicommon=1.0.9=h5eee18b_8
- libbrotlidec=1.0.9=h5eee18b_8
- libbrotlienc=1.0.9=h5eee18b_8
- libcblas=3.9.0=16_linux64_openblas
- libcublas=12.1.0.26=0
- libcublas-dev=12.1.0.26=0
- libcublas-static=12.1.0.26=0
- libcufft=11.0.2.4=0
- libcufft-dev=11.0.2.4=0
- libcufft-static=11.0.2.4=0
- libcufile=1.6.0.25=0
- libcufile-dev=1.6.0.25=0
- libcufile-static=1.6.0.25=0
- libcurand=10.3.2.56=0
- libcurand-dev=10.3.2.56=0
- libcurand-static=10.3.2.56=0
- libcurl=8.7.1=h251f7ec_0
- libcusolver=11.4.4.55=0
- libcusolver-dev=11.4.4.55=0
- libcusolver-static=11.4.4.55=0
- libcusparse=12.0.2.55=0
- libcusparse-dev=12.0.2.55=0
- libcusparse-static=12.0.2.55=0
- libdeflate=1.17=h5eee18b_1
- libedit=3.1.20230828=h5eee18b_0
- libev=4.33=h7f8727e_1
- libffi=3.4.4=h6a678d5_1
- libgcc-ng=14.1.0=h77fa898_0
- libgfortran-ng=11.2.0=h00389a5_1
- libgfortran5=11.2.0=h1234567_1
- libglu=9.0.0=hf484d3e_1
- liblapack=3.9.0=16_linux64_openblas
- libnghttp2=1.57.0=h2d74bed_0
- libnpp=12.0.2.50=0
- libnpp-dev=12.0.2.50=0
- libnpp-static=12.0.2.50=0
- libnvjitlink=12.1.55=0
- libnvjitlink-dev=12.1.55=0
- libnvjpeg=12.1.0.39=0
- libnvjpeg-dev=12.1.0.39=0
- libnvjpeg-static=12.1.0.39=0
- libopenblas=0.3.21=h043d6bf_0
- libpng=1.6.39=h5eee18b_0
- libraw=0.20.2=h10796ff_1
- libsodium=1.0.18=h7b6447c_0
- libssh2=1.11.0=h251f7ec_0
- libstdcxx-ng=14.1.0=hc0a3c3a_0
- libtiff=4.5.1=h6a678d5_0
- libuuid=2.38.1=h0b41bf4_0
- libwebp-base=1.3.2=h5eee18b_0
- libxcb=1.13=h7f98852_1004
- libzlib=1.2.13=h166bdaf_4
- libzopfli=1.0.3=he6710b0_0
- llvm-openmp=14.0.6=h9e868ea_0
- locket=1.0.0=py38h06a4308_0
- lz4-c=1.9.4=h6a678d5_1
- markupsafe=2.1.3=py38h5eee18b_0
- matplotlib-inline=0.1.6=py38h06a4308_0
- mistune=2.0.4=py38h06a4308_0
- nbclassic=1.1.0=py38h06a4308_0
- nbclient=0.8.0=py38h06a4308_0
- nbconvert=7.10.0=py38h06a4308_0
- nbformat=5.9.2=py38h06a4308_0
- ncurses=6.4=h6a678d5_0
- nest-asyncio=1.6.0=py38h06a4308_0
- networkx=3.1=py38h06a4308_0
- notebook=6.5.7=py38h06a4308_0
- notebook-shim=0.2.3=py38h06a4308_0
- nsight-compute=2023.1.0.15=0
- numpy=1.24.4=py38h59b608b_0
- occt=7.7.2=novtk_h130ccc2_101
- openexr=3.1.5=he0ac6c6_1
- openjpeg=2.5.0=hfec8fc6_2
- openssl=3.0.14=h5eee18b_0
- overrides=7.4.0=py38h06a4308_0
- packaging=23.2=py38h06a4308_0
- pandocfilters=1.5.0=pyhd3eb1b0_0
- parso=0.8.3=pyhd3eb1b0_0
- partd=1.4.1=py38h06a4308_0
- pexpect=4.8.0=pyhd3eb1b0_3
- pickleshare=0.7.5=pyhd3eb1b0_1003
- pillow=10.3.0=py38h5eee18b_0
- pip=24.0=py38h06a4308_0
- pkgutil-resolve-name=1.3.10=py38h06a4308_1
- platformdirs=3.10.0=py38h06a4308_0
- prometheus_client=0.14.1=py38h06a4308_0
- prompt-toolkit=3.0.43=py38h06a4308_0
- prompt_toolkit=3.0.43=hd3eb1b0_0
- psutil=5.9.0=py38h5eee18b_0
- pthread-stubs=0.3=h0ce48e5_1
- ptyprocess=0.7.0=pyhd3eb1b0_2
- pure_eval=0.2.2=pyhd3eb1b0_0
- pycodestyle=2.11.1=py38h06a4308_0
- pycparser=2.21=pyhd3eb1b0_0
- pygments=2.15.1=py38h06a4308_1
- python=3.8.19=h955ad1f_0
- python-dateutil=2.9.0post0=py38h06a4308_2
- python-fastjsonschema=2.16.2=py38h06a4308_0
- python-json-logger=2.0.7=py38h06a4308_0
- python_abi=3.8=2_cp38
- pywavelets=1.4.1=py38h5eee18b_0
- pyyaml=6.0.1=py38h5eee18b_0
- pyzmq=24.0.1=py38hfc09fa9_1
- qtconsole-base=5.5.2=pyha770c72_0
- qtpy=2.4.1=py38h06a4308_0
- rapidjson=1.1.0=hdb19cb5_1
- readline=8.2=h5eee18b_0
- referencing=0.30.2=py38h06a4308_0
- rfc3339-validator=0.1.4=py38h06a4308_0
- rfc3986-validator=0.1.1=py38h06a4308_0
- rpds-py=0.10.6=py38hb02cf49_0
- scikit-image=0.19.2=py38h51133e4_0
- scipy=1.9.3=py38h8ce737c_2
- send2trash=1.8.2=py38h06a4308_0
- setuptools=69.5.1=py38h06a4308_0
- six=1.16.0=pyhd3eb1b0_1
- snappy=1.1.10=h6a678d5_1
- sniffio=1.3.0=py38h06a4308_0
- soupsieve=2.5=py38h06a4308_0
- sqlite=3.45.3=h5eee18b_0
- stack_data=0.2.0=pyhd3eb1b0_0
- terminado=0.17.1=py38h06a4308_0
- tifffile=2023.4.12=py38h06a4308_0
- tinycss2=1.2.1=py38h06a4308_0
- tk=8.6.14=h39e8969_0
- toml=0.10.2=pyhd3eb1b0_0
- toolz=0.12.0=py38h06a4308_0
- tornado=6.4.1=py38h5eee18b_0
- traitlets=5.14.3=py38h06a4308_0
- typing-extensions=4.11.0=py38h06a4308_0
- typing_extensions=4.11.0=py38h06a4308_0
- wcwidth=0.2.5=pyhd3eb1b0_0
- webencodings=0.5.1=py38_1
- websocket-client=1.8.0=py38h06a4308_0
- wheel=0.43.0=py38h06a4308_0
- widgetsnbextension=4.0.10=py38h06a4308_0
- xorg-fixesproto=5.0=h7f98852_1002
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.8.4=h0b41bf4_0
- xorg-libxau=1.0.11=hd590300_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h0b41bf4_2
- xorg-libxfixes=5.0.3=h7f98852_1004
- xorg-libxmu=1.1.3=h7f98852_0
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-libxt=1.3.0=hd590300_0
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h0b41bf4_1003
- xorg-xproto=7.0.31=h27cfd23_1007
- xz=5.4.6=h5eee18b_1
- yaml=0.2.5=h7b6447c_0
- zeromq=4.3.5=h6a678d5_0
- zfp=1.0.0=h6a678d5_0
- zipp=3.17.0=py38h06a4308_0
- zlib=1.2.13=h166bdaf_4
- zstd=1.5.5=hc292b87_2
- pip:
- appdirs==1.4.4
- corrct==0.5.0
- cucim==23.10.0
- cycler==0.12.1
- dataclasses==0.6
- dicttoxml==1.7.16
- dvc-preprocessing==0.0.1
- fabio==2023.10.0
- iniconfig==2.0.0
- kiwisolver==1.4.5
- lazy-loader==0.4
- lxml==4.9.3
- mako==1.3.5
- matplotlib-scalebar==0.8.1
- nabu==2023.3.0.dev3
- nxtomo==1.1.4
- opencv-python==4.10.0.84
- pca-flats==0.0.1
- pluggy==1.3.0
- pycuda==2024.1
- pytest==7.4.3
- pyunitsystem==1.0.0
- sagbo-analysis==0.0.1
- scikit-cuda==0.5.3
- silx==1.1.2
- tomli==2.0.1
- tomoscan==2.0.0a4
prefix: /home/esrf/damasres/miniconda3/envs/sagbo-analysis