-
Notifications
You must be signed in to change notification settings - Fork 1
/
Copy pathenvironment_bean.yml
executable file
·137 lines (137 loc) · 6.1 KB
/
environment_bean.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
name: jy_anbe_py38
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- conda-forge/linux-64::_libgcc_mutex==0.1=conda_forge
- defaults/linux-64::blas==1.0=mkl
- ca-certificates
- conda-forge/linux-64::ld_impl_linux-64==2.35.1=hea4e1c9_1
- conda-forge/linux-64::libgfortran5==9.3.0=he4bcb1c_17
- conda-forge/linux-64::libstdcxx-ng==9.3.0=h2ae2ef3_17
- conda-forge/linux-64::llvm-openmp==11.0.0=hfc4b9b4_1
- conda-forge/linux-64::_openmp_mutex==4.5=1_llvm
- conda-forge/linux-64::libgfortran-ng==9.3.0=he4bcb1c_17
- conda-forge/linux-64::libgcc-ng==9.3.0=h5dbcf3e_17
- conda-forge/linux-64::mkl==2020.4=h726a3e6_304
- cudatoolkit=11.1
- defaults/linux-64::expat==2.2.10=he6710b0_2
- conda-forge/linux-64::icu==58.2=hf484d3e_1000
- defaults/linux-64::jpeg==9b=h024ee3a_2
- conda-forge/linux-64::libblas==3.9.0=7_mkl
- conda-forge/linux-64::libffi==3.3=h58526e2_2
- conda-forge/linux-64::libiconv==1.16=h516909a_0
- conda-forge/linux-64::libsodium==1.0.18=h36c2ea0_1
- conda-forge/linux-64::libuuid==2.32.1=h7f98852_1000
- conda-forge/linux-64::libuv==1.40.0=h7f98852_0
- conda-forge/linux-64::lz4-c==1.9.3=h9c3ff4c_0
- conda-forge/linux-64::ncurses==6.2=h58526e2_4
- conda-forge/linux-64::ninja==1.10.2=h4bd325d_0
- openssl
- conda-forge/linux-64::pcre==8.44=he1b5a44_0
- conda-forge/linux-64::pthread-stubs==0.4=h36c2ea0_1001
- conda-forge/linux-64::xorg-libxau==1.0.9=h7f98852_0
- conda-forge/linux-64::xorg-libxdmcp==1.1.3=h7f98852_0
- conda-forge/linux-64::xz==5.2.5=h516909a_1
- conda-forge/linux-64::zlib==1.2.11=h516909a_1010
- conda-forge/linux-64::gettext==0.19.8.1=h0b5b191_1005
- conda-forge/linux-64::libcblas==3.9.0=7_mkl
- conda-forge/linux-64::liblapack==3.9.0=7_mkl
- conda-forge/linux-64::libpng==1.6.37=h21135ba_2
- conda-forge/linux-64::libxcb==1.13=h14c3975_1002
- defaults/linux-64::libxml2==2.9.10=hb55368b_3
- conda-forge/linux-64::readline==8.0=he28a2e2_2
- conda-forge/linux-64::tk==8.6.10=h21135ba_1
- conda-forge/linux-64::zeromq==4.3.3=h58526e2_3
- conda-forge/linux-64::zstd==1.4.8=ha95c52a_1
- conda-forge/linux-64::freetype==2.10.4=h7ca028e_0
- conda-forge/linux-64::libglib==2.66.4=h164308a_1
- defaults/linux-64::libtiff==4.1.0=h2733197_1
- conda-forge/linux-64::sqlite==3.34.0=h74cdb3f_0
- conda-forge/linux-64::fontconfig==2.13.1=he4413a7_1000
- defaults/linux-64::lcms2==2.11=h396b838_0
- conda-forge/linux-64::python==3.8.6=hffdb5ce_4_cpython
- conda-forge/noarch::backcall==0.2.0=pyh9f0ad1d_0
- conda-forge/noarch::backports==1.0=py_2
- conda-forge/noarch::decorator==4.4.2=py_0
- conda-forge/linux-64::glib==2.66.4=hcd2ae1e_1
- conda-forge/noarch::idna==2.10=pyh9f0ad1d_0
- conda-forge/noarch::ipython_genutils==0.2.0=py_1
- conda-forge/noarch::olefile==0.46=pyh9f0ad1d_1
- conda-forge/noarch::parso==0.7.1=pyh9f0ad1d_0
- conda-forge/noarch::pickleshare==0.7.5=py_1003
- conda-forge/noarch::ptyprocess==0.7.0=pyhd3deb0d_0
- conda-forge/noarch::pycparser==2.20=pyh9f0ad1d_2
- conda-forge/noarch::pyparsing==2.4.7=pyh9f0ad1d_0
- conda-forge/linux-64::python_abi==3.8=1_cp38
- conda-forge/noarch::pytz==2020.5=pyhd8ed1ab_0
- defaults/linux-64::sip==4.19.13=py38he6710b0_0
- conda-forge/noarch::six==1.15.0=pyh9f0ad1d_0
- conda-forge/noarch::threadpoolctl==2.1.0=pyh5ca1d4c_0
- conda-forge/noarch::tqdm==4.55.1=pyhd8ed1ab_0
- conda-forge/noarch::typing_extensions==3.7.4.3=py_0
- conda-forge/noarch::wheel==0.36.2=pyhd3deb0d_0
- certifi
- conda-forge/linux-64::cffi==1.14.4=py38ha65f79e_1
- conda-forge/linux-64::chardet==4.0.0=py38h578d9bd_1
- conda-forge/noarch::cycler==0.10.0=py_2
- defaults/linux-64::dbus==1.13.18=hb2f20db_0
- defaults/linux-64::gstreamer==1.14.0=h28cd5cc_2
- conda-forge/linux-64::jedi==0.17.2=py38h578d9bd_1
- conda-forge/linux-64::kiwisolver==1.3.1=py38h1fd1430_1
- conda-forge/linux-64::mkl-service==2.3.0=py38h1e0a361_2
- conda-forge/noarch::pexpect==4.8.0=pyh9f0ad1d_2
- defaults/linux-64::pillow==8.1.0=py38he98fc37_0
- conda-forge/linux-64::pysocks==1.7.1=py38h924ce5b_2
- conda-forge/noarch::python-dateutil==2.8.1=py_0
- conda-forge/linux-64::pyzmq==20.0.0=py38h1d1b12f_1
- conda-forge/linux-64::tornado==6.1=py38h497a2fe_1
- conda-forge/noarch::traitlets==5.0.5=py_0
- conda-forge/linux-64::websocket-client==0.57.0=py38h578d9bd_4
- conda-forge/linux-64::brotlipy==0.7.0=py38h8df0ef7_1001
- conda-forge/linux-64::cryptography==3.3.1=py38h2b97feb_0
- defaults/linux-64::gst-plugins-base==1.14.0=hbbd80ab_1
- conda-forge/linux-64::setuptools==49.6.0=py38h578d9bd_3
- conda-forge/noarch::backports.functools_lru_cache==1.6.1=py_0
- conda-forge/noarch::joblib==1.0.0=pyhd8ed1ab_0
- conda-forge/noarch::pip==20.3.3=pyhd8ed1ab_0
- conda-forge/noarch::pygments==2.7.3=pyhd8ed1ab_0
- conda-forge/noarch::pyopenssl==20.0.1=pyhd8ed1ab_0
- defaults/linux-64::qt==5.9.7=h5867ecd_1
- defaults/linux-64::pyqt==5.9.2=py38h05f1152_4
- conda-forge/noarch::urllib3==1.26.2=pyhd8ed1ab_0
- conda-forge/noarch::wcwidth==0.2.5=pyh9f0ad1d_2
- conda-forge/noarch::prompt-toolkit==3.0.10=pyha770c72_0
- conda-forge/noarch::requests==2.25.1=pyhd3deb0d_0
- conda-forge/linux-64::ipython==7.19.0=py38h81c977d_0
- conda-forge/linux-64::ipykernel==5.4.2=py38h81c977d_0
- matplotlib
- conda-forge/linux-64::mkl_fft==1.2.0=py38hab2c0dc_1
- conda-forge/linux-64::mkl_random==1.2.0=py38hc5bc63f_1
- defaults/linux-64::numpy==1.19.2=py38h54aff64_0
- conda-forge/linux-64::pandas==1.2.0=py38h51da96c_0
- pytorch==1.12.1=cuda111py38h2d04dd0_200
- conda-forge/linux-64::scipy==1.6.0=py38hb2138dd_0
- conda-forge/noarch::torchfile==0.1.0=py_0
- conda-forge/noarch::patsy==0.5.1=py_0
- conda-forge/linux-64::scikit-learn==0.24.0=py38h658cfdd_0
- torchaudio
- torchvision
- conda-forge/noarch::visdom==0.1.8.9=0
- conda-forge/linux-64::statsmodels==0.12.1=py38h0b5ebd8_1
- conda-forge/linux-64::seaborn==0.11.1=ha770c72_0
- bioconductor-deseq2
- mageck
- ipywidgets
- pytest
- r-devtools
- r-nloptr
- openpyxl
- crispresso2
- zarr
- anndata
- snakemake
- nodejs
- sphinx
prefix: /data/pinello/SHARED_SOFTWARE/anaconda_latest/envs/jy_anbe_py38