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I am trying to create a seurat object from the available files from https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5596828. The data that is available to create a seurat object from Sci-sequencing data are the counts matrix (matrix.gz), cell annotation (txt.gz), and gene annotation (txt.gz). I am having some issue combining these files to create one seurat object. I have tried to change the file names to fit the seurat format but that does not work. Do you have any suggestions?
The text was updated successfully, but these errors were encountered:
I am having same issue keeps telling me to reinstall seuratobject. This is the message i keep receiving
"Loading required package: sp
'SeuratObject' was built with package 'Matrix' 1.6.3 but the current version is 1.6.4; it is
recomended that you reinstall 'SeuratObject' as the ABI for 'Matrix' may have changed"
I am trying to create a seurat object from the available files from https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5596828. The data that is available to create a seurat object from Sci-sequencing data are the counts matrix (matrix.gz), cell annotation (txt.gz), and gene annotation (txt.gz). I am having some issue combining these files to create one seurat object. I have tried to change the file names to fit the seurat format but that does not work. Do you have any suggestions?
The text was updated successfully, but these errors were encountered: