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Feature request for atlas analyses - port DelayedArray to Seurat #49

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stemangiola opened this issue Jul 1, 2022 · 1 comment
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@stemangiola
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Hello,

for atlas-size analyses, memory consumption is a limiting factor.

Is there any plan to port DelayedArray to Seurat?

https://bioconductor.org/packages/release/bioc/html/DelayedArray.html
https://petehaitch.github.io/BioC2020_DelayedArray_workshop/articles/Effectively_using_the_DelayedArray_framework_for_users.html

@mojaveazure
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Hi Stefano, we are working on expanding the types of matrices that can be used for expression matrices with Seurat objects, including DelayedArray-derived matrices, as part of Seurat/SeuratObject v5; we will post back here when v5 reaches beta status

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