v0.5.0

What's Changed

• Upgrade Snakemake to v8.25.5 @matinnuhamunada in #45
• Feat: Add bgcflow run --antismash_mode to enable use fungi version using BGCFlow environment variables @matinnuhamunada in #45
• Fix: Security updates @dependabot in #44 @dependabot in #46

Full Changelog: v0.4.0...v0.5.0

v0.4.0

What's Changed

• Upgrade to Snakemake v8.11.3 by @matinnuhamunada in #42

• Fix: Improve get-result command to be more intuitive
• Docs: Update citation

Full Changelog: v0.3.5...v0.4.0

v0.3.5

What's Changed

• v0.3.5 - Snakemake fix and security update by @matinnuhamunada in #39
• fix: Pin pulp version to 2.7.0 to address snakemake dependency issue: snakemake/snakemake#2606
• feat: add --profile parameters on bgcflow run to use snakemake profiles
• chore(deps): bump pip from 22.3.1 to 23.3 by @dependabot in #40

Full Changelog: v0.3.4...v0.3.5

v0.3.4

What's Changed

• Synchronize with BGCFlow version 0.7.9
• feat: add CLI option for lsabgc and ppanggolin by @matinnuhamunada in #37
• chore: Auto detect available CPU
• feat: give option to turn off panoptes

Full Changelog: v0.3.3...v0.3.4

v0.3.3

What's Changed

• fix: pin snakemake to v7.31.1 for compatibility with panoptes-ui job monitoring by @matinnuhamunada in #35
• chore: security updates by @matinnuhamunada in #35

Full Changelog: v0.3.2...v0.3.3

v0.3.2

What's Changed

• Downgrade pandas by @matinnuhamunada in #29
• chore(deps): bump urllib3 from 2.0.5 to 2.0.6 by @dependabot in #31
• chore(deps): bump cryptography from 41.0.3 to 41.0.4 by @dependabot in #30

New Contributors

• @dependabot made their first contribution in #31

Full Changelog: v0.3.1...v0.3.2

v0.3.1

What's Changed

• Dev 0.3.1 by @matinnuhamunada in #28
• Read project metadata to decide if there are some dbt models to be excuded for synchronisation
• User can also manually define which dbt models to exclude

Full Changelog: v0.3.0...v0.3.1

v0.3.0

What's Changed

• docs: refer to wiki for tutorial by @matinnuhamunada in #26
• feat: -use metabase API and dbt-metabase to upload duckdb and sync model relationships by @matinnuhamunada in #27

Full Changelog: v0.2.8...v0.3.0

v0.2.8

What's Changed

• Dev 0.2.8 by @matinnuhamunada in #25
• Improvement on mkdocs report handling and dependencies
• Utilize BGCFlow v0.7.2 version dependencies metadata
• bgcflow init will now copy examples instead of referring links to the example folder

Full Changelog: v0.2.7...v0.2.8

v0.2.7

What's Changed

• Dev 0.2.7 by @matinnuhamunada in #24

• New feature: organise report by subcategory

Full Changelog: v0.2.6...v0.2.7