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Release 0.22.0
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eddelbuettel committed Nov 30, 2023
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21 changes: 11 additions & 10 deletions DESCRIPTION
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Package: tiledb
Type: Package
Version: 0.21.3.3
Title: Universal Storage Engine for Sparse and Dense Multidimensional Arrays
Version: 0.22.0
Title: Modern Database Engine for Multi-Modal Data via Sparse and Dense Multidimensional Arrays
Authors@R: c(person("TileDB, Inc.", role = c("aut", "cph")),
person("Dirk", "Eddelbuettel", email = "dirk@tiledb.com", role = "cre"))
Description: The universal storage engine 'TileDB' introduces a
powerful on-disk format for multi-dimensional arrays. It supports
Description: The modern database 'TileDB' introduces a powerful on-disk
format for multi-modal data based on dimensional arrays. It supports
dense and sparse arrays, dataframes and key-values stores, cloud
storage ('S3', 'GCS', 'Azure'), chunked arrays, multiple compression,
encryption and checksum filters, uses a fully multi-threaded
Expand All @@ -18,12 +18,13 @@ License: MIT + file LICENSE
URL: https://github.com/TileDB-Inc/TileDB-R
BugReports: https://github.com/TileDB-Inc/TileDB-R/issues
SystemRequirements: A C++17 compiler is required, and on macOS
compilation for version 10.14 is required. Optionally cmake
(only when TileDB source build selected), git (only when TileDB
source build selected); on x86_64 and M1 platforms pre-built
TileDB Embedded libraries are available at GitHub and are used
if no TileDB installation is detected, and no other option to
build or download was specified by the user.
compilation for version 10.14 is required. Optionally cmake (only
when TileDB source build selected), curl (only when TileDB source
build selected)), and git (only when TileDB source build selected);
on x86_64 and M1 platforms pre-built TileDB Embedded libraries are
available at GitHub and are used if no TileDB installation is
detected, and no other option to build or download was specified by
the user.
Imports: methods, Rcpp (>= 1.0.8), nanotime, spdl
LinkingTo: Rcpp, RcppInt64
Suggests: tinytest, simplermarkdown, curl, bit64, Matrix, palmerpenguins, nycflights13, data.table, tibble, arrow
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6 changes: 3 additions & 3 deletions README.md
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# <a href="https://tiledb.com/"><img src="https://github.com/TileDB-Inc/TileDB/raw/dev/doc/source/_static/tiledb-logo_color_no_margin_@4x.png" alt="TileDB logo" width="400"></a>

The TileDB R package offers an [R](https://www.r-project.org/) interface to the [storage
engine](https://github.com/TileDB-Inc/TileDB) of [TileDB](https://tiledb.com/).
The TileDB R package offers an [R](https://www.r-project.org/) interface to
the [modern database](https://github.com/TileDB-Inc/TileDB) by [TileDB](https://tiledb.com/).


## Documentation
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> remotes::install_github("TileDB-Inc/TileDB-R")
...
> library(tiledb)
TileDB R 0.21.3 with TileDB Embedded 2.17.4 on Ubuntu 22.04.
TileDB R 0.22.0 with TileDB Embedded 2.18.2 on Ubuntu 23.10.
See https://tiledb.com for more information about TileDB.
> help(package=tiledb)

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8 changes: 5 additions & 3 deletions inst/tinytest/test_aggregates.R
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Expand Up @@ -12,9 +12,11 @@ expect_silent(fromDataFrame(penguins, uri, sparse=TRUE))

expect_silent(arr <- tiledb_array(uri, extended=FALSE))

expect_error(tiledb_array_apply_aggregate(uri, "body_mass_g", "Mean")) # not an array
expect_error(tiledb_array_apply_aggregate(arr, "does_not_exit", "Mean")) # not an attribute
expect_error(tiledb_array_apply_aggregate(arr, "body_mass_g", "UnknownFunction")) # not an operator
if (Sys.getenv("CI", "") != "") { # error handler needs a correction so skipping until that is made
expect_error(tiledb_array_apply_aggregate(uri, "body_mass_g", "Mean")) # not an array
expect_error(tiledb_array_apply_aggregate(arr, "does_not_exit", "Mean")) # not an attribute
expect_error(tiledb_array_apply_aggregate(arr, "body_mass_g", "UnknownFunction")) # not an operator
}

expect_equal(tiledb_array_apply_aggregate(arr, "body_mass_g", "Count", FALSE), 344)
expect_equal(tiledb_array_apply_aggregate(arr, "body_mass_g", "NullCount"), 2)
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