Changed the default clustering cutoff for FCC to 0.6

Corrected the set-target script in ana_script
amjjbonvin · May 3, 2016 · 7f864c7 · 7f864c7
1 parent 64c6e5c
commit 7f864c7
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Showing 3 changed files with 4 additions and 4 deletions.
diff --git a/HADDOCK-runfiles/T70-dimer-full-haddockparam.web b/HADDOCK-runfiles/T70-dimer-full-haddockparam.web
@@ -21,7 +21,7 @@ HaddockRunParameters (
   epsilon = 10.0,
   waterdock = False,
   clust_meth = 'FCC',
-  clust_rmsd = 0.75,
+  clust_rmsd = 0.6,
   clust_size = 4,
   fcc_ignc = False,
   ncs = SymmetrySpecification (
@@ -821,4 +821,4 @@ HaddockRunParameters (
     wn = 60.82,
   ),
   username = 'abonvin',
-)
+)
diff --git a/HADDOCK-runfiles/T70-tetramer-full-haddockparam.web b/HADDOCK-runfiles/T70-tetramer-full-haddockparam.web
@@ -21,7 +21,7 @@ HaddockMultiRunParameters (
   epsilon = 10.0,
   waterdock = False,
   clust_meth = 'FCC',
-  clust_rmsd = 0.75,
+  clust_rmsd = 0.6,
   clust_size = 4,
   fcc_ignc = True,
   ncs = SymmetrySpecification (

diff --git a/ana_scripts/set-target.csh b/ana_scripts/set-target.csh
@@ -1,7 +1,7 @@
 #!/bin/csh
 #
 setenv target complex
-setenv WDIR /Users/abonvin/capri/CASP-CAPRI/CASP-CAPRI-T70-tutorial/ana_scripts
+setenv WDIR `pwd`
 setenv refeAB $WDIR/30_70.2.AB.pdb 
 setenv refeAC $WDIR/30_70.2.AC.pdb 
 setenv refeAD $WDIR/30_70.2.AD.pdb