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rearrange figures location
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Beifang committed Jul 20, 2018
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Expand Up @@ -179,12 +179,12 @@ We provided one small dataset (tumor and matched normal bam files) to test the m
We also provided a R script to visualize MSI score distribution of MSIsensor output. ( msi score list only or msi score list accompanied with known msi status). For msi score list only as input:

R CMD BATCH "--args msi_score_only_list msi_score_only_distribution.pdf" plot.r
![](https://github.com/ding-lab/msisensor/blob/master/test/msi_score_only_distribution.jpg)
![](https://github.com/ding-lab/msisensor/blob/master/test/msi_score_only_distribution.jpg)

For msi score list accompanied with known msi status as input:

R CMD BATCH "--args msi_score_and_status_list msi_score_and_status_distribution.pdf" plot.r
![](https://github.com/ding-lab/msisensor/blob/master/test/msi_score_and_status_distribution.jpg)
![](https://github.com/ding-lab/msisensor/blob/master/test/msi_score_and_status_distribution.jpg)


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