Initial Commit

README.md

@@ -44,7 +44,7 @@ MonoPhylo is written and maintained by Daniel Portik (daniel.portik@gmail.com)
 
 The goal of running **MonoPhylo** is to determine which groupings are monophyletic in a given phylogenetic tree. In order to achieve this, it is necessary to first obtain a list of the tips in the tree and subsequently define the groups. It is also important to ensure the phylogenetic tree is properly rooted for the analysis, otherwise the groupings may not be correctly assessed. Finally, using a file that defines the major groupings (a map file), the groups can be assessed for the given phylogenetic tree. Instructions for completing each of these major tasks can be found below. 
 
-In addition to the instructions posted here, two complete example analyses can be found in the [Example-data](https://github.com/dportik/MonoPhylo/tree/master/Example-data) folder. The complete set of input files and output files generated for each step, along with instructions, can be found for each analysis folder present. This includes a full tutorial for assessing relationships in a tree that does not contain any support values ([here](https://github.com/dportik/MonoPhylo/tree/master/Example-data/Example-tree-without-support-values)) and a tutorial for assessing relationships in a tree containing bootstrap support values ([here](https://github.com/dportik/MonoPhylo/tree/master/Example-data/Example-tree-with-bootstrap-support-values)).
+In addition to the instructions posted here, two complete example analyses can be found in the [**Example-data**](https://github.com/dportik/MonoPhylo/tree/master/Example-data) folder. The complete set of input files and output files generated for each step, along with instructions, can be found for each analysis folder present. This includes a full tutorial for assessing relationships in a tree that does not contain any support values ([**here**](https://github.com/dportik/MonoPhylo/tree/master/Example-data/Example-tree-without-support-values)) and a tutorial for assessing relationships in a tree containing bootstrap support values ([**here**](https://github.com/dportik/MonoPhylo/tree/master/Example-data/Example-tree-with-bootstrap-support-values)).
 
 ### Quick Navigation for Instructions: