Merge branch 'master.dev' into 'master'

Release 3.3.0 See merge request piclas/piclas!952
piclas-framework · Aug 12, 2024 · 36cfc7f · 36cfc7f
2 parents a2e37f1 + d717085
commit 36cfc7f
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diff --git a/.github/workflows/cmake-ninja.yml b/.github/workflows/cmake-ninja.yml
@@ -13,22 +13,25 @@ jobs:
     # See: https://docs.github.com/en/free-pro-team@latest/actions/learn-github-actions/managing-complex-workflows#using-a-build-matrix
     runs-on: ubuntu-latest
 
-    # Use centos7
+    # Use centos8
     container:
-      image: centos:7
+      image: centos:8
       options: --privileged
 
     steps:
 
     - name: Install GIT
       shell: bash
       run: |
-        yum -y install https://packages.endpointdev.com/rhel/7/os/x86_64/endpoint-repo.x86_64.rpm
+        cd /etc/yum.repos.d/
+        sed -i 's/mirrorlist/#mirrorlist/g' /etc/yum.repos.d/CentOS-*
+        sed -i 's|#baseurl=http://mirror.centos.org|baseurl=http://vault.centos.org|g' /etc/yum.repos.d/CentOS-*
+        yum -y install https://packages.endpointdev.com/rhel/8/main/x86_64/endpoint-repo.noarch.rpm
         yum -y install git
         git --version
 
     - name: Checkout repository including the .git directory
-      uses: actions/checkout@v3
+      uses: actions/checkout@v4
       with:
         fetch-depth: 0
 
@@ -45,7 +48,9 @@ jobs:
         rpm -U --quiet p7zip-16.02-20.el7.x86_64.rpm
         rpm -U --quiet p7zip-plugins-16.02-20.el7.x86_64.rpm
         yum install -y epel-release
-        yum install -y make libasan gcc-gfortran gcc-c++ unzip openblas-devel lapack-devel zlib-devel tree fuse-sshfs fuse-libs file openmpi-devel wget python3
+        yum install -y 'dnf-command(config-manager)'
+        yum config-manager --set-enabled powertools
+        yum install -y make libasan gcc-gfortran gcc-c++ unzip openblas-devel lapack-devel zlib-devel tree fuse-sshfs fuse-libs file openmpi-devel wget python3 diffutils
         groupadd fuse
         user="$(whoami)"
         usermod -a -G fuse "$user"
@@ -58,13 +63,13 @@ jobs:
     - name: Install GNU GCC 8
       shell: bash
       run: |
-        yum install -y centos-release-scl
-        yum install -y devtoolset-8-gcc*
-        source /opt/rh/devtoolset-8/enable
-        scl enable devtoolset-8 bash
-        which gcc
-        echo 'source /opt/rh/devtoolset-8/enable' >> ~/.bashrc
-        echo 'scl enable devtoolset-8 bash' >> ~/.bashrc
+        #yum install -y centos-release-scl
+        #yum install -y devtoolset-8-gcc*
+        #source /opt/rh/devtoolset-8/enable
+        #scl enable devtoolset-8 bash
+        #which gcc
+        #echo 'source /opt/rh/devtoolset-8/enable' >> ~/.bashrc
+        #echo 'scl enable devtoolset-8 bash' >> ~/.bashrc
         #GCC_DIR='/opt/rh/devtoolset-8/root/usr'
         GCC_DIR=$(dirname $(dirname $(which gcc)))
         echo 'export PATH="'${GCC_DIR}'/bin:$PATH"' >> ~/.bashrc
@@ -129,9 +134,9 @@ jobs:
         cat ~/.bashrc
         echo "======================================================================="
 
-    - name: Install PETSc 3.18.4
+    - name: Install PETSc 3.19.3
       run: |
-        PETSCVERSION='3.18.4'
+        PETSCVERSION='3.19.3'
         source ~/.bashrc
         wget --no-check-certificate https://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-${PETSCVERSION}.tar.gz
         tar -xvf petsc-${PETSCVERSION}.tar.gz
@@ -191,14 +196,42 @@ jobs:
         source ~/.bashrc
         cmake --build build_DSMC
 
+    - name: Configure CMake Piclas BGK
+      shell: bash
+      # Configure CMake in a 'build' subdirectory. `CMAKE_BUILD_TYPE` is only required if you are using a single-configuration generator such as make.
+      # See https://cmake.org/cmake/help/latest/variable/CMAKE_BUILD_TYPE.html?highlight=cmake_build_type
+      run: |
+        source ~/.bashrc
+        cmake -G Ninja -B build_BGK -DPICLAS_INSTRUCTION=-mtune=generic -DPOSTI_BUILD_PICLAS2VTK=OFF -DPOSTI_BUILD_SUPERB=OFF -DPICLAS_POLYNOMIAL_DEGREE=1 -DPICLAS_TIMEDISCMETHOD=BGK-Flow -DCMAKE_BUILD_TYPE=Release -DLIBS_USE_MPI=ON -DLIBS_BUILD_HDF5=OFF -DPICLAS_READIN_CONSTANTS=ON -DCMAKE_INSTALL_PREFIX=/usr
+
+    - name: Build Piclas BGK
+      shell: bash
+      run: |
+        source ~/.bashrc
+        cmake --build build_BGK
+
+    - name: Configure CMake Piclas FP
+      shell: bash
+      # Configure CMake in a 'build' subdirectory. `CMAKE_BUILD_TYPE` is only required if you are using a single-configuration generator such as make.
+      # See https://cmake.org/cmake/help/latest/variable/CMAKE_BUILD_TYPE.html?highlight=cmake_build_type
+      run: |
+        source ~/.bashrc
+        cmake -G Ninja -B build_FP -DPICLAS_INSTRUCTION=-mtune=generic -DPOSTI_BUILD_PICLAS2VTK=OFF -DPOSTI_BUILD_SUPERB=OFF -DPICLAS_POLYNOMIAL_DEGREE=1 -DPICLAS_TIMEDISCMETHOD=FP-Flow -DCMAKE_BUILD_TYPE=Release -DLIBS_USE_MPI=ON -DLIBS_BUILD_HDF5=OFF -DPICLAS_READIN_CONSTANTS=ON -DCMAKE_INSTALL_PREFIX=/usr
+
+    - name: Build Piclas FP
+      shell: bash
+      run: |
+        source ~/.bashrc
+        cmake --build build_FP
+
     - name: Configure CMake Piclas Poisson Leapfrog
       shell: bash
       # Configure CMake in a 'build' subdirectory. `CMAKE_BUILD_TYPE` is only required if you are using a single-configuration generator such as make.
       # See https://cmake.org/cmake/help/latest/variable/CMAKE_BUILD_TYPE.html?highlight=cmake_build_type
       run: |
         source ~/.bashrc
-        cmake -G Ninja -B build_poisson_leapfrog -DPICLAS_INSTRUCTION=-mtune=generic -DPOSTI_BUILD_PICLAS2VTK=OFF -DPOSTI_BUILD_SUPERB=OFF -DPICLAS_TIMEDISCMETHOD=Leapfrog -DPICLAS_EQNSYSNAME=poisson -DPICLAS_PETSC=ON -DCMAKE_BUILD_TYPE=Release -DLIBS_USE_MPI=ON -DLIBS_BUILD_HDF5=OFF -DPICLAS_READIN_CONSTANTS=ON -DCMAKE_INSTALL_PREFIX=/usr
-        #cmake -G Ninja -B build_poisson_leapfrog -DPICLAS_INSTRUCTION=-mtune=generic -DPOSTI_BUILD_PICLAS2VTK=OFF -DPOSTI_BUILD_SUPERB=OFF -DPICLAS_TIMEDISCMETHOD=Leapfrog -DPICLAS_EQNSYSNAME=poisson -DPICLAS_PETSC=OFF -DCMAKE_BUILD_TYPE=Release -DLIBS_USE_MPI=ON -DLIBS_BUILD_HDF5=OFF -DPICLAS_READIN_CONSTANTS=ON -DCMAKE_INSTALL_PREFIX=/usr
+        cmake -G Ninja -B build_poisson_leapfrog -DPICLAS_INSTRUCTION=-mtune=generic -DPOSTI_BUILD_PICLAS2VTK=OFF -DPOSTI_BUILD_SUPERB=OFF -DPICLAS_TIMEDISCMETHOD=Leapfrog -DPICLAS_EQNSYSNAME=poisson -DLIBS_USE_PETSC=ON -DCMAKE_BUILD_TYPE=Release -DLIBS_USE_MPI=ON -DLIBS_BUILD_HDF5=OFF -DPICLAS_READIN_CONSTANTS=ON -DCMAKE_INSTALL_PREFIX=/usr
+        #cmake -G Ninja -B build_poisson_leapfrog -DPICLAS_INSTRUCTION=-mtune=generic -DPOSTI_BUILD_PICLAS2VTK=OFF -DPOSTI_BUILD_SUPERB=OFF -DPICLAS_TIMEDISCMETHOD=Leapfrog -DPICLAS_EQNSYSNAME=poisson -DLIBS_USE_PETSC=OFF -DCMAKE_BUILD_TYPE=Release -DLIBS_USE_MPI=ON -DLIBS_BUILD_HDF5=OFF -DPICLAS_READIN_CONSTANTS=ON -DCMAKE_INSTALL_PREFIX=/usr
 
     - name: Build Piclas Poisson Leapfrog
       shell: bash
@@ -268,6 +301,62 @@ jobs:
         ls -la
         cd ..
 
+        echo "======================================================================="
+        ls -la build_BGK/bin
+        echo "======================================================================="
+        cd build_BGK
+
+        # Declare an array of strings
+        declare -a PROGS=("piclas")
+
+        # Iterate the string array
+        for PROG in ${PROGS[@]}; do
+          rm -rf AppDir
+          DESTDIR=AppDir ninja install
+          mkdir -p AppDir/usr/share/icons
+          cp ../docs/logo.png AppDir/usr/share/icons/${PROG}.png
+          mkdir -p AppDir/usr/share/icons/hicolor/64x64/apps/
+          ln -sf ../../../${PROG}.png AppDir/usr/share/icons/hicolor/64x64/apps/
+          cp ../.github/workflows/piclas.desktop template.desktop
+          mv template.desktop ${PROG}.desktop
+          sed -i -e "s/Name=.*/Name=${PROG}/" ${PROG}.desktop
+          sed -i -e "s/Exec=.*/Exec=${PROG}/" ${PROG}.desktop
+          sed -i -e "s/Icon=.*/Icon=${PROG}/" ${PROG}.desktop
+          ./../linuxdeploy-x86_64.AppImage --appdir AppDir --output appimage --desktop-file=${PROG}.desktop
+        done
+
+        # Check folder contents
+        ls -la
+        cd ..
+
+        echo "======================================================================="
+        ls -la build_FP/bin
+        echo "======================================================================="
+        cd build_FP
+
+        # Declare an array of strings
+        declare -a PROGS=("piclas")
+
+        # Iterate the string array
+        for PROG in ${PROGS[@]}; do
+          rm -rf AppDir
+          DESTDIR=AppDir ninja install
+          mkdir -p AppDir/usr/share/icons
+          cp ../docs/logo.png AppDir/usr/share/icons/${PROG}.png
+          mkdir -p AppDir/usr/share/icons/hicolor/64x64/apps/
+          ln -sf ../../../${PROG}.png AppDir/usr/share/icons/hicolor/64x64/apps/
+          cp ../.github/workflows/piclas.desktop template.desktop
+          mv template.desktop ${PROG}.desktop
+          sed -i -e "s/Name=.*/Name=${PROG}/" ${PROG}.desktop
+          sed -i -e "s/Exec=.*/Exec=${PROG}/" ${PROG}.desktop
+          sed -i -e "s/Icon=.*/Icon=${PROG}/" ${PROG}.desktop
+          ./../linuxdeploy-x86_64.AppImage --appdir AppDir --output appimage --desktop-file=${PROG}.desktop
+        done
+
+        # Check folder contents
+        ls -la
+        cd ..
+
         echo "======================================================================="
         ls -la build_poisson_leapfrog/bin
         echo "======================================================================="
@@ -304,21 +393,25 @@ jobs:
         cp build_single/piclas2vtk*x86_64.AppImage piclas2vtk
         cp build_single/superB*x86_64.AppImage superB
         cp build_DSMC/piclas-*x86_64.AppImage piclasDSMC
+        cp build_BGK/piclas-*x86_64.AppImage piclasBGK
+        cp build_FP/piclas-*x86_64.AppImage piclasFP
         cp build_poisson_leapfrog/piclas-*x86_64.AppImage piclasLeapfrogHDG
         md5sum piclasDSMC > md5sum.txt
+        md5sum piclasBGK > md5sum.txt
+        md5sum piclasFP > md5sum.txt
         md5sum piclasLeapfrogHDG >> md5sum.txt
         md5sum piclas2vtk >> md5sum.txt
         md5sum superB >> md5sum.txt
         cat md5sum.txt
-        7z a release-assets/piclas-linux64.zip piclasDSMC piclasLeapfrogHDG piclas2vtk superB md5sum.txt
+        7z a release-assets/piclas-linux64.zip piclasDSMC piclasBGK piclasFP piclasLeapfrogHDG piclas2vtk superB md5sum.txt
         ls -la release-assets
-        mv piclasDSMC piclasLeapfrogHDG piclas2vtk superB md5sum.txt artifacts/.
+        mv piclasDSMC piclasBGK piclasFP piclasLeapfrogHDG piclas2vtk superB md5sum.txt artifacts/.
         ls -la artifacts
 
     - name: Upload artifacts
-      uses: actions/upload-artifact@v3
+      uses: actions/upload-artifact@v4
       with:
-        name: piclas-binaries-v3.2.1
+        name: piclas-binaries-v3.3.0
         path: artifacts
 
     - name: Upload release asset

diff --git a/.gitignore b/.gitignore
@@ -70,6 +70,7 @@ commit.h
 CMakeCache.txt
 ctags.txt
 CMakeFiles/
+tags
 .tags
 
 # comma separated files

diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
@@ -8,11 +8,11 @@
 #      - if: '$CI_PIPELINE_CREATED_AT =~ /^\d\d\d\d-\d\d-\d[1,3,5,7,9]T.*/ || $CI_COMMIT_REF_NAME !~ /^gitlab.custom.*/'
 #        variables:
 #          PIPELINE_NAME: '🔵 MPICH: on ${CI_PIPELINE_CREATED_AT} 123 ${CI_COMMIT_REF_NAME} 123'
-#  
+#
 #      - if: '$CI_PIPELINE_CREATED_AT =~ /^\d\d\d\d-\d\d-\d[0,2,4,6,8]T.*/|| $CI_COMMIT_REF_NAME =~ /^gitlab.custom.*/'
 #        variables:
 #          PIPELINE_NAME: '🟠 OpenMPI: $(date +%d) ${CI_COMMIT_REF_NAME}'
-#  
+#
 #      - when: never
 
 # ----------------------------------------------------------------------------------------------------------------------------------------------------
@@ -84,24 +84,24 @@ before_script:
   - echo "Perform arithmetic with 0-prefixed numbers by telling bash to use base-10 by specifying 10#"
   - if [ "$((10#$day % 2))" == "0" ]; then
       echo "Even day number ($day). Loading OpenMPI";
-      module purge;
-      module load  cmake/3.26.4  gcc/13.2.0  openmpi/4.1.5/gcc/13.2.0      hdf5/1.14.0/gcc/13.2.0/openmpi/4.1.5      hopr/master/gcc/13.2.0/openmpi/4.1.5/hdf5/1.14.0      petsc/3.19.3/gcc/13.2.0/openmpi/4.1.5;
+      module purge || true;
+      module load  cmake/3.26.4  gcc/13.2.0  openmpi/4.1.5/gcc/13.2.0      hdf5/1.14.0/gcc/13.2.0/openmpi/4.1.5      hopr/master/gcc/13.2.0/openmpi/4.1.5/hdf5/1.14.0      petsc/3.19.3/gcc/13.2.0/openmpi/4.1.5 || true;
     else
       echo "Odd day number ($day). Loading MPICH";
-      module purge;
-      module load  cmake/3.26.4  gcc/13.2.0  mpich/4.1.2/gcc/13.2.0        hdf5/1.14.0/gcc/13.2.0/mpich/4.1.2        hopr/master/gcc/13.2.0/mpich/4.1.2/hdf5/1.14.0        petsc/3.19.3/gcc/13.2.0/mpich/4.1.2;
+      module purge || true;
+      module load  cmake/3.26.4  gcc/13.2.0  mpich/4.1.2/gcc/13.2.0        hdf5/1.14.0/gcc/13.2.0/mpich/4.1.2        hopr/master/gcc/13.2.0/mpich/4.1.2/hdf5/1.14.0        petsc/3.19.3/gcc/13.2.0/mpich/4.1.2 || true;
     fi
   - if [ -n "${DO_MPICH}" ]; then
       echo "DO_MPICH activated. Loading MPICH.";
-      module purge;
-      module load  cmake/3.26.4  gcc/13.2.0  mpich/4.1.2/gcc/13.2.0        hdf5/1.14.0/gcc/13.2.0/mpich/4.1.2        hopr/master/gcc/13.2.0/mpich/4.1.2/hdf5/1.14.0        petsc/3.19.3/gcc/13.2.0/mpich/4.1.2;
+      module purge || true;
+      module load  cmake/3.26.4  gcc/13.2.0  mpich/4.1.2/gcc/13.2.0        hdf5/1.14.0/gcc/13.2.0/mpich/4.1.2        hopr/master/gcc/13.2.0/mpich/4.1.2/hdf5/1.14.0        petsc/3.19.3/gcc/13.2.0/mpich/4.1.2 || true;
     fi
   - if [ -n "${DO_MPICH_DEBUG}" ]; then
       echo "DO_MPICH_DEBUG activated. Loading MPICH with --with-device=ch3:sock which allows over-subscription without performance loss but cannot be used for shared memory arrays safely!";
-      module purge;
-      module load  cmake/3.26.4  gcc/13.2.0  mpich-debug/4.1.2/gcc/13.2.0  hdf5/1.14.0/gcc/13.2.0/mpich-debug/4.1.2  hopr/master/gcc/13.2.0/mpich-debug/4.1.2/hdf5/1.14.0  petsc/3.19.3/gcc/13.2.0/mpich-debug/4.1.2;
+      module purge || true;
+      module load  cmake/3.26.4  gcc/13.2.0  mpich-debug/4.1.2/gcc/13.2.0  hdf5/1.14.0/gcc/13.2.0/mpich-debug/4.1.2  hopr/master/gcc/13.2.0/mpich-debug/4.1.2/hdf5/1.14.0  petsc/3.19.3/gcc/13.2.0/mpich-debug/4.1.2 || true;
     fi
-  - module list
+  - module list || true
 
 # ----------------------------------------------------------------------------------------------------------------------------------------------------
 # Stages
@@ -419,16 +419,16 @@ build_poisson_petsc:
   stage: build
   script:
     - mkdir -p build_poisson_petsc_release_RK3 ; cd build_poisson_petsc_release_RK3
-    - cmake .. -DCMAKE_BUILD_TYPE=Release -DPICLAS_EQNSYSNAME=poisson -DPICLAS_PETSC=ON -DPICLAS_CODE_ANALYZE=ON -DPICLAS_TIMEDISCMETHOD=RK3 -DLIBS_BUILD_HDF5=OFF ; $GENERATOR -j $NCORES all
+    - cmake .. -DCMAKE_BUILD_TYPE=Release -DPICLAS_EQNSYSNAME=poisson -DLIBS_USE_PETSC=ON -DPICLAS_CODE_ANALYZE=ON -DPICLAS_TIMEDISCMETHOD=RK3 -DLIBS_BUILD_HDF5=OFF ; $GENERATOR -j $NCORES all
     - cd ..
     - mkdir -p build_poisson_petsc_debug_RK3 ; cd build_poisson_petsc_debug_RK3
-    - cmake .. -DCMAKE_BUILD_TYPE=Debug -DPICLAS_EQNSYSNAME=poisson -DPICLAS_PETSC=ON -DPICLAS_CODE_ANALYZE=ON -DPICLAS_TIMEDISCMETHOD=RK3 -DLIBS_BUILD_HDF5=OFF ; $GENERATOR -j $NCORES all
+    - cmake .. -DCMAKE_BUILD_TYPE=Debug -DPICLAS_EQNSYSNAME=poisson -DLIBS_USE_PETSC=ON -DPICLAS_CODE_ANALYZE=ON -DPICLAS_TIMEDISCMETHOD=RK3 -DLIBS_BUILD_HDF5=OFF ; $GENERATOR -j $NCORES all
     - cd ..
     - mkdir -p build_poisson_petsc_release_Leapfrog ; cd build_poisson_petsc_release_Leapfrog
-    - cmake .. -DCMAKE_BUILD_TYPE=Release -DPICLAS_EQNSYSNAME=poisson -DPICLAS_PETSC=ON -DPICLAS_CODE_ANALYZE=ON -DPICLAS_TIMEDISCMETHOD=Leapfrog -DLIBS_BUILD_HDF5=OFF ; $GENERATOR -j $NCORES all
+    - cmake .. -DCMAKE_BUILD_TYPE=Release -DPICLAS_EQNSYSNAME=poisson -DLIBS_USE_PETSC=ON -DPICLAS_CODE_ANALYZE=ON -DPICLAS_TIMEDISCMETHOD=Leapfrog -DLIBS_BUILD_HDF5=OFF ; $GENERATOR -j $NCORES all
     - cd ..
     - mkdir -p build_poisson_petsc_debug_Leapfrog ; cd build_poisson_petsc_debug_Leapfrog
-    - cmake .. -DCMAKE_BUILD_TYPE=Debug -DPICLAS_EQNSYSNAME=poisson -DPICLAS_PETSC=ON -DPICLAS_CODE_ANALYZE=ON -DPICLAS_TIMEDISCMETHOD=Leapfrog -DLIBS_BUILD_HDF5=OFF ; $GENERATOR -j $NCORES all
+    - cmake .. -DCMAKE_BUILD_TYPE=Debug -DPICLAS_EQNSYSNAME=poisson -DLIBS_USE_PETSC=ON -DPICLAS_CODE_ANALYZE=ON -DPICLAS_TIMEDISCMETHOD=Leapfrog -DLIBS_BUILD_HDF5=OFF ; $GENERATOR -j $NCORES all
     - cd ..
 
 build_DSMC:
@@ -461,7 +461,7 @@ build_DSMC:
     - cmake .. -DCMAKE_BUILD_TYPE=Release -DPICLAS_TIMEDISCMETHOD=DSMC -DLIBS_BUILD_HDF5=OFF -DPICLAS_POLYNOMIAL_DEGREE=1 ; $GENERATOR -j $NCORES all
     - if [ -n "${DO_WEEKLY}" ]; then
         cd .. ;
-        mkdir -p build_radiation ; cd build_radiation ; 
+        mkdir -p build_radiation ; cd build_radiation ;
         cmake .. -DLIBS_BUILD_HDF5=OFF -DPICLAS_BUILD_POSTI=ON -DPOSTI_BUILD_SUPERB=ON -DPICLAS_READIN_CONSTANTS=ON -DPICLAS_TIMEDISCMETHOD=Radiation -DPICLAS_INTKIND8=ON ; $GENERATOR -j $NCORES all ;
       fi
 
@@ -518,6 +518,22 @@ build_no_git:
   rules:
     - if: '$DO_WEEKLY'
 
+build_outside_repository:
+  tags: [withmodules-concurrent]
+  stage: build
+  cache:
+    <<: *reggie_cache
+  script:
+    - echo " Installing branch $CI_COMMIT_REF_NAME outside the piclas directory/repository"
+    - REPOPATH=$(echo `pwd`)
+    - cd .. ;
+    - mkdir -p build-piclas-outside ; cd build-piclas-outside ;
+    - cmake ${REPOPATH} -DLIBS_BUILD_HDF5=OFF
+    - $GENERATOR -j $NCORES all
+    - cd .. ; rm -r build-piclas-outside ;
+  rules:
+    - if: '$DO_WEEKLY'
+
 build_no_git_libs:
   tags: [withmodules-concurrent]
   stage: build
@@ -537,6 +553,21 @@ build_no_git_libs:
   rules:
     - if: '$DO_WEEKLY'
 
+build_petsc_in_piclas:
+  tags: [withmodules-concurrent]
+  needs: [reggie_download]
+  cache:
+    <<: *reggie_cache
+  stage: build
+  script:
+    - mkdir -p build_petsc_lib ; cd build_petsc_lib
+    - cmake -DPICLAS_EQNSYSNAME=poisson -DPICLAS_TIMEDISCMETHOD=RK3 -DPICLAS_CODE_ANALYZE=ON -DLIBS_BUILD_HDF5=OFF -DLIBS_USE_PETSC=ON -DLIBS_BUILD_PETSC=ON ..
+    - echo " Compiling with Poisson, RK3 and self-built PETSc (-DPICLAS_EQNSYSNAME=poisson -DPICLAS_TIMEDISCMETHOD=RK3 -DLIBS_USE_PETSC=ON -DLIBS_BUILD_PETSC=ON) ..."
+    - $GENERATOR -j $NCORES all
+    - python ../reggie/reggie.py -e ./bin/piclas ../regressioncheck/NIG_poisson_PETSC
+  rules:
+    - if: '$DO_WEEKLY'
+
 # ----------------------------------------------------------------------------------------------------------------------------------------------------
 # Stage "reggie_checkin": Run most simple reggie with previous builds on check-in
 # ----------------------------------------------------------------------------------------------------------------------------------------------------
@@ -737,6 +768,12 @@ NIG_PIC_poisson_Boris-Leapfrog:
   script:
     - cd build ; python ../reggie/reggie.py ../regressioncheck/NIG_PIC_poisson_Boris-Leapfrog/
 
+NIG_PIC_poisson_Boris-Leapfrog_PETSC:
+  <<: *defaults_nightly
+  stage: reggie_nightly
+  script:
+    - cd build ; python ../reggie/reggie.py ../regressioncheck/NIG_PIC_poisson_Boris-Leapfrog_PETSC/
+
 NIG_PIC_poisson_Leapfrog:
   <<: *defaults_nightly
   stage: reggie_nightly
@@ -1049,4 +1086,4 @@ github:
     - git clone -b master --single-branch git@piclas.boltzplatz.eu:piclas/piclas.git piclas_github ;
     - cd piclas_github ;
     - git remote add piclas-framework git@github.com:piclas-framework/piclas.git ;
-    - git push --force --follow-tags piclas-framework master ;
+    - git push --force --follow-tags piclas-framework master ;