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Preserve order of variables in combine_by_coords #16127

Preserve order of variables in combine_by_coords

Preserve order of variables in combine_by_coords #16127

Triggered via pull request January 27, 2025 17:30
Status Failure
Total duration 18m 3s
Artifacts 12

ci.yaml

on: pull_request
detect ci trigger
3s
Event File
2s
Matrix: test

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2 errors and 150 warnings
windows-latest py3.10: xarray\tests\test_backends.py#L6383
test_zarr_region_chunk_partial_offset[2] PermissionError: [Errno 13] Permission denied: 'C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pytest-of-runneradmin\\pytest-0\\popen-gw1\\test_zarr_region_chunk_partial1\\foo.zarr\\foo/1'
windows-latest py3.10
Process completed with exit code 1.
Event File
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
detect ci trigger
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.10 bare-minimum
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.10 bare-minimum: xarray/core/duck_array_ops.py#L236
invalid value encountered in cast
ubuntu-latest py3.10 bare-minimum: xarray/core/duck_array_ops.py#L236
invalid value encountered in cast
ubuntu-latest py3.10 bare-minimum: xarray/namedarray/core.py#L264
Duplicate dimension names present: dimensions {'x'} appear more than once in dims=('x', 'x'). We do not yet support duplicate dimension names, but we do allow initial construction of the object. We recommend you rename the dims immediately to become distinct, as most xarray functionality is likely to fail silently if you do not. To rename the dimensions you will need to set the ``.dims`` attribute of each variable, ``e.g. var.dims=('x0', 'x1')``.
ubuntu-latest py3.10 bare-minimum: xarray/namedarray/core.py#L264
Duplicate dimension names present: dimensions {'x'} appear more than once in dims=('x', 'x'). We do not yet support duplicate dimension names, but we do allow initial construction of the object. We recommend you rename the dims immediately to become distinct, as most xarray functionality is likely to fail silently if you do not. To rename the dimensions you will need to set the ``.dims`` attribute of each variable, ``e.g. var.dims=('x0', 'x1')``.
ubuntu-latest py3.10 bare-minimum
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 bare-minimum
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.10 bare-minimum
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12 flaky
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.12 flaky
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12 flaky
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='3440a247-eec8-42eb-8e02-4cbae4c1115f'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='3440a247-eec8-42eb-8e02-4cbae4c1115f'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='16bfc9a3-6d85-43e8-a101-349433cb8832'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='97244a8c-ac87-443f-bd18-c31b8a09ed9a'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='16bfc9a3-6d85-43e8-a101-349433cb8832'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='97244a8c-ac87-443f-bd18-c31b8a09ed9a'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/pydap/handlers/dap.py#L123
PyDAP was unable to determine the DAP protocol defaulting to DAP2 which is consider legacy and may result in slower responses. For more, see go to https://www.opendap.org/faq-page.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/pydap/handlers/dap.py#L123
PyDAP was unable to determine the DAP protocol defaulting to DAP2 which is consider legacy and may result in slower responses. For more, see go to https://www.opendap.org/faq-page.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/bs4/builder/_lxml.py#L124
The 'strip_cdata' option of HTMLParser() has never done anything and will eventually be removed.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/bs4/builder/_lxml.py#L124
The 'strip_cdata' option of HTMLParser() has never done anything and will eventually be removed.
ubuntu-latest py3.12 flaky
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.11 all-but-dask
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.11 all-but-dask
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.11 all-but-dask
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.10
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x100a23b20>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='3be82a42-6fd0-4842-af1d-99d2a4ff8ad8'), but file is not already closed. This may indicate a bug.
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x12a790eb0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='2c807a57-7802-4054-8993-020a10008072'), but file is not already closed. This may indicate a bug.
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x100a23b20>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='3be82a42-6fd0-4842-af1d-99d2a4ff8ad8'), but file is not already closed. This may indicate a bug.
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x12a790eb0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='2c807a57-7802-4054-8993-020a10008072'), but file is not already closed. This may indicate a bug.
macos-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
macos-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
macos-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 min-all-deps
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.10 min-all-deps
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 min-all-deps
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.12 all-but-numba
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.12 all-but-numba
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12 all-but-numba
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12 all-but-numba
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at var1 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at dim2 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at var2 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at var3 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at numbers is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at time is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at dim3 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at var1 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at dim2 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at var2 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.10
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7fb063250820>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='3880e0db-3147-4ba6-aac4-69b8926b539c'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7fb0632502b0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='4b6eecd8-d933-4efd-b907-3a113590033e'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7fb063250820>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='3880e0db-3147-4ba6-aac4-69b8926b539c'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7fb0632502b0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='4b6eecd8-d933-4efd-b907-3a113590033e'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
ubuntu-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
ubuntu-latest py3.10
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/unraisableexception.py#L85
Exception ignored in: <function CachingFileManager.__del__ at 0x122aca340> Traceback (most recent call last): File "/Users/runner/work/xarray/xarray/xarray/backends/file_manager.py", line 255, in __del__ warnings.warn( RuntimeWarning: deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <_io.BufferedReader name='/var/folders/2s/h6hvv9ps03xgz_krkkstvq_r0000gn/T/tmpn_f83edh/temp-67.nc'>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='e85110d9-530e-453c-8a30-fad1c09ca378'), but file is not already closed. This may indicate a bug.
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/unraisableexception.py#L85
Exception ignored in: <function CachingFileManager.__del__ at 0x122aca340> Traceback (most recent call last): File "/Users/runner/work/xarray/xarray/xarray/backends/file_manager.py", line 255, in __del__ warnings.warn( RuntimeWarning: deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <_io.BufferedReader name='/var/folders/2s/h6hvv9ps03xgz_krkkstvq_r0000gn/T/tmpn_f83edh/temp-67.nc'>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='e85110d9-530e-453c-8a30-fad1c09ca378'), but file is not already closed. This may indicate a bug.
macos-latest py3.12: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
macos-latest py3.12: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.12
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
macos-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/unraisableexception.py#L85
Exception ignored in: <function CachingFileManager.__del__ at 0x7f2589dfa160> Traceback (most recent call last): File "/home/runner/work/xarray/xarray/xarray/backends/file_manager.py", line 255, in __del__ warnings.warn( RuntimeWarning: deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <_io.BufferedReader name='/tmp/tmpagqmkibp/temp-67.nc'>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='47c8ed8a-9d6c-405b-87f9-3f4265dddbb3'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/unraisableexception.py#L85
Exception ignored in: <function CachingFileManager.__del__ at 0x7f2589dfa160> Traceback (most recent call last): File "/home/runner/work/xarray/xarray/xarray/backends/file_manager.py", line 255, in __del__ warnings.warn( RuntimeWarning: deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <_io.BufferedReader name='/tmp/tmpagqmkibp/temp-67.nc'>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='47c8ed8a-9d6c-405b-87f9-3f4265dddbb3'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
ubuntu-latest py3.12: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at x is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\_pytest\python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x00000276645332E0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='fb33208e-e199-49fb-958b-5c2b5bfda4eb'), but file is not already closed. This may indicate a bug.
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\_pytest\python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x000002765FA2A8C0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='3f56c662-9581-402c-a1b8-10c8faed609c'), but file is not already closed. This may indicate a bug.
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\_pytest\python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x00000276645332E0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='fb33208e-e199-49fb-958b-5c2b5bfda4eb'), but file is not already closed. This may indicate a bug.
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\_pytest\python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x000002765FA2A8C0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='3f56c662-9581-402c-a1b8-10c8faed609c'), but file is not already closed. This may indicate a bug.
windows-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
windows-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\zarr\_storage\store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\zarr\_storage\store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
windows-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at x is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at x is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at x is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at x is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest py3.12
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']

Artifacts

Produced during runtime
Name Size
Event File
3.92 KB
Test results for Linux-3.10
157 KB
Test results for Linux-3.10 bare-minimum
138 KB
Test results for Linux-3.10 min-all-deps
177 KB
Test results for Linux-3.11 all-but-dask
184 KB
Test results for Linux-3.12
162 KB
Test results for Linux-3.12 all-but-numba
163 KB
Test results for Linux-3.12 flaky
664 Bytes
Test results for Windows-3.10
166 KB
Test results for Windows-3.12
172 KB
Test results for macOS-3.10
166 KB
Test results for macOS-3.12
169 KB