check-standard

Clean up installation #2

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10 errors and 8 warnings

cannot open the connection to 'https://zenodo.org/record/3260758/files/hnscc_expression.rds'

cannot open the connection to 'https://zenodo.org/record/7074291/files/lr_network_human_21122021.rds'

cannot open the connection to 'https://zenodo.org/record/5840787/files/seurat_obj_subset_integrated_zonation.rds'

cannot open the connection to 'https://zenodo.org/record/3260758/files/hnscc_expression.rds'

there is no package called ‘DiagrammeRsvg’

trying to use CRAN without setting a mirror

Can't select columns that don't exist.

there is no package called ‘nsga2R’

R CMD check found ERRORs

there is no package called 'testthat'

'::' or ':::' imports not declared from:

get_expressed_genes:

Missing link or links in Rd file 'get_ligand_target_links_oi.Rd':

Functions or methods with usage in Rd file 'get_optimized_parameters_nsga2r.Rd' but not in code:

Documented arguments not in \usage in Rd file 'get_lfc_celltype.Rd':

LazyData DB of 5.8 MB without LazyDataCompression set

Files in the 'vignettes' directory but no files in 'inst/doc':

Directory 'inst/doc' does not exist.