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v0.5.0 - Haploidy, small fixes

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@sanjaynagi sanjaynagi released this 04 Jun 13:00
· 581 commits to master since this release
v0.5.0
1deb55b

The following fixes and improvements have been made:

  • The pipeline can now handle haploids

  • the 'samples' column of samples.tsv file has been renamed to 'sampleID', for clarity.

  • the samples.tsv file is now referred to as 'metadata' internally, rather than 'samples', for clarity.

  • fix bug that occured if IRmutations module is not run.

  • scripts now directly read the config for the contrasts, as opposed to previously a separate file was made at the beginning at the pipeline.

  • There is now a dedicated discord channel, see README.

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